Volume : VII, Issue : III, March - 2018

In Silico Analysis And Protein Studies In Eggplant Mottled Dwarf Virus

Dsvgk Kaladhar

Abstract :

 

Proteins are the main components present within the host cell that control many biological funtions of viruses. Eggplant mottled dwarf virus (EMDV) is a member of the genus Nucleorhabdovirus causes mottled disease in eggplants (Solanum melongena). Gene prediction from GenBank: NC_025389 using FSENESV0  was predicted with seven genes like nucleocapsid protein, X protein, phosphoprotein, putative movement protein, matrix protein, glycoprotein and RNA–directed RNA polymerase protein. The genes of EMDV were shown relationhip with TVCV, MMV, PCMV and PYDV. The results shown only protein 4 and protein 6 are stable.  In Coprinopsis cinerea with CC1G_00342 – RNA–directed RNA polymerase, CC1G_00194 – glycoprotein and CC1G_08598 – G–X–X–X–Q–X–W domain–containing protein didnt shown any interactions. CC1G_01977 – phosphoprotein phosphatase and CC1G_10289 – nuclear matrix protein NMP200 shown good interactions with mitochondrial and golgi proteins.

Article: Download PDF    DOI : https://www.doi.org/10.36106/paripex  

Cite This Article:

DSVGK Kaladhar, In Silico Analysis And Protein Studies In Eggplant Mottled Dwarf Virus, PARIPEX‾INDIAN JOURNAL OF RESEARCH : Volume-7 | Issue-3 | March-2018

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